SHOGoiN Cell Transcriptome: GSM1269112

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269112


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T127Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 68.6122
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 50.2060
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 47.2987
4 ENSG00000156030 ELMSAN1 ELM2 and Myb/SANT domain containing 1 43.4016
5 ENSG00000060982 BCAT1 branched chain amino acid transaminase 1 41.9514
6 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 37.4838
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.0988
8 ENSG00000075624 ACTB actin beta 32.9201
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.8445
10 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 31.9303

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277095 NA -0.1328
57169 ENSG00000277089 NA -0.1328
57168 ENSG00000277087 NA -0.1328
57167 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1328
57166 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1328
57164 ENSG00000277081 NA -0.1328
57163 ENSG00000277077 NA -0.1328
57162 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1328
10 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 31.9303
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.8445

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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