SHOGoiN Cell Transcriptome: GSM1269113

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269113


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T128Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000119718 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 179.2985
2 ENSG00000106591 MRPL32 mitochondrial ribosomal protein L32 110.2145
3 ENSG00000138600 SPPL2A signal peptide peptidase like 2A 81.6255
4 ENSG00000142089 IFITM3 interferon induced transmembrane protein 3 45.3326
5 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 37.7289
6 ENSG00000101608 MYL12A myosin light chain 12A 36.5033
7 ENSG00000135390 ATP5MC2 ATP synthase membrane subunit c locus 2 32.7014
8 ENSG00000112081 SRSF3 serine and arginine rich splicing factor 3 25.7730
9 ENSG00000112304 ACOT13 acyl-CoA thioesterase 13 25.6230
10 ENSG00000258646 NA 25.5979

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277344 RNU1-6P RNA, U1 small nuclear 6, pseudogene -0.0146
57169 ENSG00000277342 NA -0.0146
57168 ENSG00000277341 RNU6-489P RNA, U6 small nuclear 489, pseudogene -0.0146
57167 ENSG00000277340 NA -0.0146
57164 ENSG00000277332 NA -0.0146
10 ENSG00000258646 NA 25.5979
9 ENSG00000112304 ACOT13 acyl-CoA thioesterase 13 25.6230
8 ENSG00000112081 SRSF3 serine and arginine rich splicing factor 3 25.7730
7 ENSG00000135390 ATP5MC2 ATP synthase membrane subunit c locus 2 32.7014
6 ENSG00000101608 MYL12A myosin light chain 12A 36.5033

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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