SHOGoiN Cell Transcriptome: GSM1269114

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269114


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T129Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 154.1646
2 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 65.6772
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 58.8615
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 58.1465
5 ENSG00000137801 THBS1 thrombospondin 1 50.3665
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 46.4106
7 ENSG00000075624 ACTB actin beta 41.7821
8 ENSG00000167552 TUBA1A tubulin alpha 1a 38.7717
9 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 31.3162
10 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 28.4892

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0815
57169 ENSG00000277081 NA -0.0815
57168 ENSG00000277077 NA -0.0815
57167 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0815
57165 ENSG00000277073 MIR6131 microRNA 6131 -0.0815
57164 ENSG00000277066 NA -0.0815
57162 ENSG00000277063 MIR8084 microRNA 8084 -0.0815
10 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 28.4892
9 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 31.3162
8 ENSG00000167552 TUBA1A tubulin alpha 1a 38.7717

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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