SHOGoiN Cell Transcriptome: GSM1269115

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269115


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T130Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 115.1523
2 ENSG00000115414 FN1 fibronectin 1 104.9481
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 101.1596
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 86.8925
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 59.8641
6 ENSG00000120708 TGFBI transforming growth factor beta induced 38.5383
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 28.9558
8 ENSG00000144810 COL8A1 collagen type VIII alpha 1 chain 24.3749
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 24.1005
10 ENSG00000134294 SLC38A2 solute carrier family 38 member 2 22.1987

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277099 NA -0.0751
57167 ENSG00000277096 NA -0.0751
57166 ENSG00000277095 NA -0.0751
57164 ENSG00000277089 NA -0.0751
57163 ENSG00000277087 NA -0.0751
57162 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0751
10 ENSG00000134294 SLC38A2 solute carrier family 38 member 2 22.1987
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 24.1005
8 ENSG00000144810 COL8A1 collagen type VIII alpha 1 chain 24.3749
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 28.9558

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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