SHOGoiN Cell Transcriptome: GSM1269116

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269116


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T131Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 111.6880
2 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 93.6044
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 84.1563
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.2313
5 ENSG00000115414 FN1 fibronectin 1 53.2199
6 ENSG00000226608 FTLP3 ferritin, light polypeptide pseudogene 3 42.2552
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 37.6434
8 ENSG00000087086 FTL ferritin, light polypeptide 37.4267
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 32.0720
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 19.6294

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0947
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0947
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0947
60672 ENSG00000283118 NA -0.0947
60671 ENSG00000283110 NA -0.0947
60670 ENSG00000283108 NA -0.0947
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0947
60668 ENSG00000283098 NA -0.0947
60667 ENSG00000283097 NA -0.0947
60666 ENSG00000283096 NA -0.0947

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...