SHOGoiN Cell Transcriptome: GSM1269117

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269117


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T132Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000167601 AXL AXL receptor tyrosine kinase 119.5980
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 83.1548
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 63.5583
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 63.0337
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 49.5332
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.8883
7 ENSG00000115414 FN1 fibronectin 1 36.5903
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 35.1105
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.1509
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 30.9913

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277081 NA -0.1069
57169 ENSG00000277077 NA -0.1069
57168 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1069
57166 ENSG00000277073 MIR6131 microRNA 6131 -0.1069
57165 ENSG00000277066 NA -0.1069
57163 ENSG00000277063 MIR8084 microRNA 8084 -0.1069
57162 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1069
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 30.9913
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.1509
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 35.1105

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...