SHOGoiN Cell Transcriptome: GSM1269121

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269121


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T136Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000135047 CTSL cathepsin L 138.4361
2 ENSG00000133961 NUMB NUMB, endocytic adaptor protein 97.6967
3 ENSG00000269743 SLC25A53 solute carrier family 25 member 53 70.3520
4 ENSG00000082212 ME2 malic enzyme 2 69.8619
5 ENSG00000116704 SLC35D1 solute carrier family 35 member D1 65.0268
6 ENSG00000070831 CDC42 cell division cycle 42 61.8578
7 ENSG00000176986 SEC24C SEC24 homolog C, COPII coat complex component 57.5127
8 ENSG00000221923 ZNF880 zinc finger protein 880 48.2998
9 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 45.3921
10 ENSG00000025800 KPNA6 karyopherin subunit alpha 6 43.6933

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277332 NA -0.0191
57166 ENSG00000277327 SPDYE20P speedy/RINGO cell cycle regulator family member E20, pseudogene -0.0191
57163 ENSG00000277324 NA -0.0191
10 ENSG00000025800 KPNA6 karyopherin subunit alpha 6 43.6933
9 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 45.3921
8 ENSG00000221923 ZNF880 zinc finger protein 880 48.2998
7 ENSG00000176986 SEC24C SEC24 homolog C, COPII coat complex component 57.5127
6 ENSG00000070831 CDC42 cell division cycle 42 61.8578
5 ENSG00000116704 SLC35D1 solute carrier family 35 member D1 65.0268
4 ENSG00000082212 ME2 malic enzyme 2 69.8619

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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