SHOGoiN Cell Transcriptome: GSM1269122

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269122


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T137Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 116.7068
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 79.6940
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 60.7768
4 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 45.0977
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 42.1013
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 36.2536
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.9145
8 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 27.0297
9 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 24.7790
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 24.0679

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1102
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1102
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1102
60672 ENSG00000283118 NA -0.1102
60671 ENSG00000283110 NA -0.1102
60670 ENSG00000283108 NA -0.1102
60669 ENSG00000283103 NA -0.1102
60668 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1102
60667 ENSG00000283098 NA -0.1102
60666 ENSG00000283097 NA -0.1102

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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