SHOGoiN Cell Transcriptome: GSM1269124

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269124


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T139Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 89.5791
2 ENSG00000115414 FN1 fibronectin 1 88.1365
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 60.1010
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 52.5069
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 46.6820
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 45.5932
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.1903
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 39.3465
9 ENSG00000075624 ACTB actin beta 39.1151
10 ENSG00000184009 ACTG1 actin gamma 1 32.0246

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1210
57168 ENSG00000277109 NA -0.1210
57167 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1210
57164 ENSG00000277103 NA -0.1210
10 ENSG00000184009 ACTG1 actin gamma 1 32.0246
9 ENSG00000075624 ACTB actin beta 39.1151
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 39.3465
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.1903
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 45.5932
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 46.6820

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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