SHOGoiN Cell Transcriptome: GSM1269126

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269126


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T141Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.7189
2 ENSG00000115414 FN1 fibronectin 1 83.7021
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 76.1977
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 75.6736
5 ENSG00000137801 THBS1 thrombospondin 1 65.6483
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 49.6828
7 ENSG00000105974 CAV1 caveolin 1 45.1319
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 42.3282
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 41.5544
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.3298

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.0940
57168 ENSG00000277099 NA -0.0940
57166 ENSG00000277096 NA -0.0940
57165 ENSG00000277095 NA -0.0940
57163 ENSG00000277089 NA -0.0940
57162 ENSG00000277087 NA -0.0940
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.3298
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 41.5544
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 42.3282
7 ENSG00000105974 CAV1 caveolin 1 45.1319

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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