SHOGoiN Cell Transcriptome: GSM1269126

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269126


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T141Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.2007
2 ENSG00000115414 FN1 fibronectin 1 76.9032
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 72.5331
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 72.1299
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 60.2855
6 ENSG00000182718 ANXA2 annexin A2 58.2375
7 ENSG00000137801 THBS1 thrombospondin 1 55.4800
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 45.8528
9 ENSG00000105974 CAV1 caveolin 1 41.8859
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 34.8389

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0897
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0897
58733 ENSG00000285992 novel transcript -0.0897
58732 ENSG00000285991 novel transcript -0.0897
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0897
58730 ENSG00000285989 TEC -0.0897
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0897
58728 ENSG00000285987 NA -0.0897
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0897
58726 ENSG00000285985 NA -0.0897

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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