SHOGoiN Cell Transcriptome: GSM1269129

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269129


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T144Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 171.2838
2 ENSG00000167552 TUBA1A tubulin alpha 1a 62.8835
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 62.8508
4 ENSG00000155657 TTN titin 56.1498
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.9838
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.2158
7 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 29.9937
8 ENSG00000180730 SHISA2 shisa family member 2 28.6129
9 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 28.2857
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.2780

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0822
57170 ENSG00000277109 NA -0.0822
57169 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0822
57166 ENSG00000277103 NA -0.0822
57163 ENSG00000277099 NA -0.0822
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.2780
9 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 28.2857
8 ENSG00000180730 SHISA2 shisa family member 2 28.6129
7 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 29.9937
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.2158

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...