SHOGoiN Cell Transcriptome: GSM1269130

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269130


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T145Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 106.9518
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 106.0896
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 65.6727
4 ENSG00000167552 TUBA1A tubulin alpha 1a 63.2914
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 41.4319
6 ENSG00000075624 ACTB actin beta 30.7456
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.8658
8 ENSG00000119335 SET SET nuclear proto-oncogene 29.4846
9 ENSG00000133055 MYBPH myosin binding protein H 25.8657
10 ENSG00000115414 FN1 fibronectin 1 22.8804

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277119 NA -0.1053
57170 ENSG00000277118 NA -0.1053
57169 ENSG00000277117 ICOS ligand -0.1053
57166 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1053
57165 ENSG00000277109 NA -0.1053
57164 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1053
10 ENSG00000115414 FN1 fibronectin 1 22.8804
9 ENSG00000133055 MYBPH myosin binding protein H 25.8657
8 ENSG00000119335 SET SET nuclear proto-oncogene 29.4846
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.8658

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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