SHOGoiN Cell Transcriptome: GSM1269131

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269131


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T146Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 107.9484
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 82.2490
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 73.6899
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 63.4589
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 61.3772
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 56.5717
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 36.7075
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 29.1782
9 ENSG00000116489 CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 28.7574
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.6135

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1087
57170 ENSG00000277057 MIR6779 microRNA 6779 -0.1087
57169 ENSG00000277056 NA -0.1087
57167 ENSG00000277052 MIR6763 microRNA 6763 -0.1087
57166 ENSG00000277051 NA -0.1087
57165 ENSG00000277050 NA -0.1087
57164 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1087
57162 ENSG00000277047 NA -0.1087
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.6135
9 ENSG00000116489 CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 28.7574

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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