SHOGoiN Cell Transcriptome: GSM1269132

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269132


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T147Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 137.6329
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 62.0068
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 57.1458
4 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 51.1131
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 48.5471
6 ENSG00000087086 FTL ferritin light chain 44.8674
7 ENSG00000115414 FN1 fibronectin 1 44.2380
8 ENSG00000184009 ACTG1 actin gamma 1 33.2185
9 ENSG00000075624 ACTB actin beta 31.6014
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 30.7880

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277171 NA -0.1015
57170 ENSG00000277170 NA -0.1015
57168 ENSG00000277168 NA -0.1015
57167 ENSG00000277162 NA -0.1015
57166 ENSG00000277161 PIGW phosphatidylinositol glycan anchor biosynthesis class W -0.1015
57164 ENSG00000277159 NA -0.1015
57162 ENSG00000277157 HIST1H4D histone cluster 1 H4 family member d -0.1015
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 30.7880
9 ENSG00000075624 ACTB actin beta 31.6014
8 ENSG00000184009 ACTG1 actin gamma 1 33.2185

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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