SHOGoiN Cell Transcriptome: GSM1269132

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269132


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T147Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 137.6329
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 62.0068
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 57.1458
4 ENSG00000226608 FTLP3 ferritin, light polypeptide pseudogene 3 51.1131
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 48.5471
6 ENSG00000087086 FTL ferritin, light polypeptide 44.8674
7 ENSG00000115414 FN1 fibronectin 1 44.2380
8 ENSG00000184009 ACTG1 actin gamma 1 33.2185
9 ENSG00000075624 ACTB actin, beta 31.6014
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 30.7880

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1015
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1015
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1015
60672 ENSG00000283118 NA -0.1015
60671 ENSG00000283110 NA -0.1015
60670 ENSG00000283108 NA -0.1015
60669 ENSG00000283103 NA -0.1015
60668 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1015
60667 ENSG00000283098 NA -0.1015
60666 ENSG00000283097 NA -0.1015

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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