SHOGoiN Cell Transcriptome: GSM1269137

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269137


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T150Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 104.7784
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 96.7684
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.0795
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 58.1616
5 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 40.4943
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 40.3239
7 ENSG00000115414 FN1 fibronectin 1 38.5401
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 33.9955
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.7455
10 ENSG00000184009 ACTG1 actin gamma 1 25.4742

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277077 NA -0.1121
57170 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1121
57168 ENSG00000277073 MIR6131 microRNA 6131 -0.1121
57167 ENSG00000277067 uncharacterized LOC102724843 -0.1121
57166 ENSG00000277066 NA -0.1121
57164 ENSG00000277063 MIR8084 microRNA 8084 -0.1121
57163 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1121
10 ENSG00000184009 ACTG1 actin gamma 1 25.4742
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.7455
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 33.9955

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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