SHOGoiN Cell Transcriptome: GSM1269137

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269137


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T150Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 93.9270
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 83.7171
3 ENSG00000182718 ANXA2 annexin A2 75.6891
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 66.1578
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 53.4738
6 ENSG00000087086 FTL ferritin light chain 37.9919
7 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 35.8518
8 ENSG00000100316 RPL3 ribosomal protein L3 34.4634
9 ENSG00000115414 FN1 fibronectin 1 34.0249
10 ENSG00000075624 ACTB actin beta 31.5090

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1019
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1019
58733 ENSG00000285992 novel transcript -0.1019
58732 ENSG00000285991 novel transcript -0.1019
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1019
58730 ENSG00000285989 TEC -0.1019
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1019
58728 ENSG00000285987 NA -0.1019
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1019
58726 ENSG00000285985 NA -0.1019

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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