SHOGoiN Cell Transcriptome: GSM1269138

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269138


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T151Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 121.4523
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.0733
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.0241
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 41.6704
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.9122
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.2616
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.7156
8 ENSG00000075624 ACTB actin beta 27.0640
9 ENSG00000137801 THBS1 thrombospondin 1 26.2621
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 25.3356

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277135 NA -0.1087
57170 ENSG00000277133 NA -0.1087
57169 ENSG00000277130 NA -0.1087
57168 ENSG00000277129 NA -0.1087
57167 ENSG00000277128 NA -0.1087
57166 ENSG00000277127 NA -0.1087
57165 ENSG00000277124 NA -0.1087
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 25.3356
9 ENSG00000137801 THBS1 thrombospondin 1 26.2621
8 ENSG00000075624 ACTB actin beta 27.0640

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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