SHOGoiN Cell Transcriptome: GSM1269140

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269140


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T153Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.5005
2 ENSG00000167601 AXL AXL receptor tyrosine kinase 88.0346
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 70.0593
4 ENSG00000075624 ACTB actin beta 52.0970
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.5088
6 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 32.2970
7 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 31.8312
8 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 30.8347
9 ENSG00000105974 CAV1 caveolin 1 30.7312
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 30.5629

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277063 MIR8084 microRNA 8084 -0.1335
57169 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1335
57167 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1335
57166 ENSG00000277057 MIR6779 microRNA 6779 -0.1335
57165 ENSG00000277056 NA -0.1335
57163 ENSG00000277052 MIR6763 microRNA 6763 -0.1335
57162 ENSG00000277050 NA -0.1335
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 30.5629
9 ENSG00000105974 CAV1 caveolin 1 30.7312
8 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 30.8347

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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