SHOGoiN Cell Transcriptome: GSM1269142

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269142


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T155Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 127.2709
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.5956
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 56.8229
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 46.2651
5 ENSG00000184009 ACTG1 actin gamma 1 40.9363
6 ENSG00000079332 SAR1A secretion associated Ras related GTPase 1A 38.2100
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 38.0024
8 ENSG00000115414 FN1 fibronectin 1 32.5898
9 ENSG00000075624 ACTB actin beta 31.1169
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.0410

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277099 NA -0.1095
57167 ENSG00000277096 NA -0.1095
57166 ENSG00000277095 NA -0.1095
57164 ENSG00000277089 NA -0.1095
57163 ENSG00000277087 NA -0.1095
57162 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1095
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.0410
9 ENSG00000075624 ACTB actin beta 31.1169
8 ENSG00000115414 FN1 fibronectin 1 32.5898
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 38.0024

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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