SHOGoiN Cell Transcriptome: GSM1269144

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269144


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T156Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.3881
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.9014
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 68.4834
4 ENSG00000115414 FN1 fibronectin 1 56.3105
5 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 53.0175
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 51.2091
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 46.8747
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 46.8747
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.9078
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 36.2709

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277125 NA -0.1072
57170 ENSG00000277124 NA -0.1072
57166 ENSG00000277120 MIR6089 microRNA 6089 -0.1072
57165 ENSG00000277119 NA -0.1072
57164 ENSG00000277118 NA -0.1072
57163 ENSG00000277117 ICOS ligand -0.1072
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 36.2709
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.9078
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 46.8747
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 46.8747

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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