SHOGoiN Cell Transcriptome: GSM1269148

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269148


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T158Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 106.3750
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 104.4602
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.2134
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.7859
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 41.7424
6 ENSG00000167552 TUBA1A tubulin alpha 1a 35.2052
7 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 34.2091
8 ENSG00000137801 THBS1 thrombospondin 1 31.3176
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.0481
10 ENSG00000128595 CALU calumenin 24.5386

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277117 ICOS ligand -0.1162
57168 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1162
57167 ENSG00000277109 NA -0.1162
57166 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1162
57163 ENSG00000277103 NA -0.1162
10 ENSG00000128595 CALU calumenin 24.5386
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.0481
8 ENSG00000137801 THBS1 thrombospondin 1 31.3176
7 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 34.2091
6 ENSG00000167552 TUBA1A tubulin alpha 1a 35.2052

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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