SHOGoiN Cell Transcriptome: GSM1269151

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269151


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T159Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 145.3405
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.8292
3 ENSG00000075624 ACTB actin beta 51.6902
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 49.1449
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 47.1640
6 ENSG00000167552 TUBA1A tubulin alpha 1a 45.7364
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 45.4763
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 39.5115
9 ENSG00000137801 THBS1 thrombospondin 1 37.1045
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.3188

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277057 MIR6779 microRNA 6779 -0.0955
57170 ENSG00000277056 NA -0.0955
57168 ENSG00000277052 MIR6763 microRNA 6763 -0.0955
57167 ENSG00000277051 NA -0.0955
57166 ENSG00000277050 NA -0.0955
57165 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0955
57163 ENSG00000277047 NA -0.0955
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.3188
9 ENSG00000137801 THBS1 thrombospondin 1 37.1045
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 39.5115

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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