SHOGoiN Cell Transcriptome: GSM1269152

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269152


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T160Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 101.3727
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 95.5353
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 79.2739
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.8343
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 44.8481
6 ENSG00000131016 AKAP12 A-kinase anchoring protein 12 37.2146
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 35.9530
8 ENSG00000075624 ACTB actin beta 34.9480
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 32.5318
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.8861

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277099 NA -0.1086
57169 ENSG00000277096 NA -0.1086
57168 ENSG00000277095 NA -0.1086
57166 ENSG00000277089 NA -0.1086
57165 ENSG00000277087 NA -0.1086
57164 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1086
57163 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1086
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.8861
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 32.5318
8 ENSG00000075624 ACTB actin beta 34.9480

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...