SHOGoiN Cell Transcriptome: GSM1269154

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269154


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T162Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 149.5915
2 ENSG00000155657 TTN titin 107.6048
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 55.0185
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 53.5437
5 ENSG00000167552 TUBA1A tubulin alpha 1a 52.5507
6 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 37.3918
7 ENSG00000109063 MYH3 myosin heavy chain 3 35.8347
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.4129
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 32.1155
10 ENSG00000133055 MYBPH myosin binding protein H 29.4891

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277099 NA -0.0767
57169 ENSG00000277096 NA -0.0767
57168 ENSG00000277095 NA -0.0767
57166 ENSG00000277089 NA -0.0767
57165 ENSG00000277087 NA -0.0767
57164 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0767
57163 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0767
10 ENSG00000133055 MYBPH myosin binding protein H 29.4891
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 32.1155
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.4129

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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