SHOGoiN Cell Transcriptome: GSM1269155

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269155


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T163Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 127.8108
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 89.0716
3 ENSG00000115414 FN1 fibronectin 1 74.0480
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 67.5400
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.1184
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 40.6256
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 35.7942
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 34.8603
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.6984
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 30.9775

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277099 NA -0.0918
57168 ENSG00000277096 NA -0.0918
57167 ENSG00000277095 NA -0.0918
57165 ENSG00000277089 NA -0.0918
57164 ENSG00000277087 NA -0.0918
57163 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0918
57162 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0918
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 30.9775
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.6984
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 34.8603

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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