SHOGoiN Cell Transcriptome: GSM1269156

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269156


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T164Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 105.4295
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 94.8295
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 80.9336
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 55.0867
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 47.1292
6 ENSG00000131711 MAP1B microtubule associated protein 1B 44.9765
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 35.4602
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 34.8218
9 ENSG00000075624 ACTB actin beta 32.3425
10 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 31.7784

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277096 NA -0.1109
57169 ENSG00000277095 NA -0.1109
57167 ENSG00000277089 NA -0.1109
57166 ENSG00000277087 NA -0.1109
57165 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1109
57164 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1109
57162 ENSG00000277081 NA -0.1109
10 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 31.7784
9 ENSG00000075624 ACTB actin beta 32.3425
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 34.8218

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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