SHOGoiN Cell Transcriptome: GSM1269159

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269159


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T167Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 92.0626
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.1418
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 69.4804
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 59.9021
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 56.9114
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 40.2976
7 ENSG00000137801 THBS1 thrombospondin 1 34.9749
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 34.1053
9 ENSG00000091986 CCDC80 coiled-coil domain containing 80 32.2081
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 29.9815

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277109 NA -0.1236
57170 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1236
57167 ENSG00000277103 NA -0.1236
57164 ENSG00000277099 NA -0.1236
57162 ENSG00000277096 NA -0.1236
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 29.9815
9 ENSG00000091986 CCDC80 coiled-coil domain containing 80 32.2081
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 34.1053
7 ENSG00000137801 THBS1 thrombospondin 1 34.9749
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 40.2976

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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