SHOGoiN Cell Transcriptome: GSM1269161

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269161


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T169Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 69.5246
2 ENSG00000115414 FN1 fibronectin 1 67.2537
3 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 65.4957
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 63.0588
5 ENSG00000131711 MAP1B microtubule associated protein 1B 55.0990
6 ENSG00000091986 CCDC80 coiled-coil domain containing 80 52.6621
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 52.3075
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 49.4933
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 42.8388
10 ENSG00000075624 ACTB actin beta 33.0759

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277147 LINC00869 long intergenic non-protein coding RNA 869 -0.1136
57170 ENSG00000277146 NA -0.1136
57168 ENSG00000277144 NA -0.1136
57167 ENSG00000277143 NA -0.1136
57166 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1136
57165 ENSG00000277141 NA -0.1136
57164 ENSG00000277138 MIR6509 microRNA 6509 -0.1136
57162 ENSG00000277136 NA -0.1136
10 ENSG00000075624 ACTB actin beta 33.0759
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 42.8388

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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