SHOGoiN Cell Transcriptome: GSM1269162

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269162


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T170Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 92.6788
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.4691
3 ENSG00000115414 FN1 fibronectin 1 67.1918
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 61.1528
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 50.0129
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 47.8122
7 ENSG00000137801 THBS1 thrombospondin 1 46.1233
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.9794
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 30.5651
10 ENSG00000131016 AKAP12 A-kinase anchoring protein 12 29.2856

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1080
57168 ENSG00000277109 NA -0.1080
57167 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1080
57164 ENSG00000277103 NA -0.1080
10 ENSG00000131016 AKAP12 A-kinase anchoring protein 12 29.2856
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 30.5651
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.9794
7 ENSG00000137801 THBS1 thrombospondin 1 46.1233
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 47.8122
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 50.0129

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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