SHOGoiN Cell Transcriptome: GSM1269163

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269163


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T171Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.6445
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 82.4203
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 74.7854
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 67.9480
5 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 63.3763
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 51.9845
7 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 36.9689
8 ENSG00000137801 THBS1 thrombospondin 1 36.6684
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.8997
10 ENSG00000115414 FN1 fibronectin 1 35.7841

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277109 NA -0.1020
57170 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1020
57167 ENSG00000277103 NA -0.1020
57164 ENSG00000277099 NA -0.1020
57162 ENSG00000277096 NA -0.1020
10 ENSG00000115414 FN1 fibronectin 1 35.7841
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.8997
8 ENSG00000137801 THBS1 thrombospondin 1 36.6684
7 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 36.9689
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 51.9845

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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