SHOGoiN Cell Transcriptome: GSM1269164

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269164


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T172Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 100.7941
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.2667
3 ENSG00000115414 FN1 fibronectin 1 72.9781
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 54.4601
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 51.3018
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 45.5003
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.2273
8 ENSG00000184009 ACTG1 actin gamma 1 30.1407
9 ENSG00000075624 ACTB actin beta 29.8337
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 29.6360

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277117 ICOS ligand -0.1052
57168 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1052
57167 ENSG00000277109 NA -0.1052
57166 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1052
57163 ENSG00000277103 NA -0.1052
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 29.6360
9 ENSG00000075624 ACTB actin beta 29.8337
8 ENSG00000184009 ACTG1 actin gamma 1 30.1407
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.2273
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 45.5003

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...