SHOGoiN Cell Transcriptome: GSM1269165

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269165


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T173Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.3336
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 102.1232
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 86.6502
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 50.1245
5 ENSG00000134294 SLC38A2 solute carrier family 38 member 2 35.6387
6 ENSG00000115414 FN1 fibronectin 1 33.2244
7 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 31.2608
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 30.5848
9 ENSG00000131711 MAP1B microtubule associated protein 1B 29.7693
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.5118

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277146 NA -0.1037
57169 ENSG00000277144 NA -0.1037
57168 ENSG00000277143 NA -0.1037
57167 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1037
57166 ENSG00000277141 NA -0.1037
57165 ENSG00000277138 MIR6509 microRNA 6509 -0.1037
57163 ENSG00000277136 NA -0.1037
57162 ENSG00000277133 NA -0.1037
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.5118
9 ENSG00000131711 MAP1B microtubule associated protein 1B 29.7693

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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