SHOGoiN Cell Transcriptome: GSM1269166

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269166


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T174Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 165.0175
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 78.6212
3 ENSG00000155657 TTN titin 69.4630
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 64.2644
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.4663
6 ENSG00000133055 MYBPH myosin binding protein H 28.9344
7 ENSG00000167552 TUBA1A tubulin alpha 1a 26.9674
8 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 26.6416
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 25.0195
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 22.1583

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277103 NA -0.0794
57167 ENSG00000277099 NA -0.0794
57165 ENSG00000277096 NA -0.0794
57164 ENSG00000277095 NA -0.0794
57162 ENSG00000277089 NA -0.0794
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 22.1583
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 25.0195
8 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 26.6416
7 ENSG00000167552 TUBA1A tubulin alpha 1a 26.9674
6 ENSG00000133055 MYBPH myosin binding protein H 28.9344

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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