SHOGoiN Cell Transcriptome: GSM1269167

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269167


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T175Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 186.6856
2 ENSG00000155657 TTN titin 67.8792
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.5843
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 43.4843
5 ENSG00000159173 TNNI1 troponin I type 1 (skeletal, slow) 27.5833
6 ENSG00000167552 TUBA1A tubulin, alpha 1a 26.9784
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 26.6914
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.7636
9 ENSG00000176887 SOX11 SRY (sex determining region Y)-box 11 25.0767
10 ENSG00000075624 ACTB actin, beta 23.0878

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0717
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0717
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0717
60672 ENSG00000283118 NA -0.0717
60671 ENSG00000283110 NA -0.0717
60670 ENSG00000283108 NA -0.0717
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0717
60668 ENSG00000283098 NA -0.0717
60667 ENSG00000283097 NA -0.0717
60666 ENSG00000283096 NA -0.0717

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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