SHOGoiN Cell Transcriptome: GSM1269168

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269168


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T176Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 89.0574
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 79.3701
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 76.3164
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 61.0132
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 52.2385
6 ENSG00000167552 TUBA1A tubulin alpha 1a 40.9366
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.6002
8 ENSG00000075624 ACTB actin beta 31.4247
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 31.0386
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 27.8797

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277087 NA -0.1294
57170 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1294
57169 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1294
57167 ENSG00000277081 NA -0.1294
57166 ENSG00000277077 NA -0.1294
57165 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1294
57163 ENSG00000277073 MIR6131 microRNA 6131 -0.1294
57162 ENSG00000277066 NA -0.1294
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 27.8797
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 31.0386

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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