SHOGoiN Cell Transcriptome: GSM1269169

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269169


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T177Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 92.5452
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 81.9259
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 64.9171
4 ENSG00000115414 FN1 fibronectin 1 53.0150
5 ENSG00000137801 THBS1 thrombospondin 1 43.4268
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.6908
7 ENSG00000091986 CCDC80 coiled-coil domain containing 80 40.3823
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 39.8140
9 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 36.8425
10 ENSG00000075624 ACTB actin beta 34.5611

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277138 MIR6509 microRNA 6509 -0.1059
57169 ENSG00000277136 NA -0.1059
57168 ENSG00000277135 NA -0.1059
57167 ENSG00000277133 NA -0.1059
57166 ENSG00000277130 NA -0.1059
57165 ENSG00000277129 NA -0.1059
57164 ENSG00000277128 NA -0.1059
57163 ENSG00000277127 NA -0.1059
57162 ENSG00000277125 NA -0.1059
10 ENSG00000075624 ACTB actin beta 34.5611

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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