SHOGoiN Cell Transcriptome: GSM1269171

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269171


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T178Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 122.0554
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.0110
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 59.9469
4 ENSG00000167552 TUBA1A tubulin alpha 1a 42.0761
5 ENSG00000075624 ACTB actin beta 41.3708
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 40.0362
7 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 29.8258
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.7390
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.7065
10 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 29.3267

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277127 NA -0.1000
57170 ENSG00000277125 NA -0.1000
57169 ENSG00000277124 NA -0.1000
57165 ENSG00000277120 MIR6089 microRNA 6089 -0.1000
57164 ENSG00000277119 NA -0.1000
57163 ENSG00000277118 NA -0.1000
57162 ENSG00000277117 ICOS ligand -0.1000
10 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 29.3267
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.7065
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.7390

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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