SHOGoiN Cell Transcriptome: GSM1269173

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269173


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T179Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 160.1875
2 ENSG00000115414 FN1 fibronectin 1 62.9292
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 50.5218
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 50.4920
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 49.1187
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 44.9332
7 ENSG00000091986 CCDC80 coiled-coil domain containing 80 32.7169
8 ENSG00000137801 THBS1 thrombospondin 1 32.2751
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 31.2481
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.0869

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0867
57168 ENSG00000277103 NA -0.0867
57165 ENSG00000277099 NA -0.0867
57163 ENSG00000277096 NA -0.0867
57162 ENSG00000277095 NA -0.0867
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.0869
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 31.2481
8 ENSG00000137801 THBS1 thrombospondin 1 32.2751
7 ENSG00000091986 CCDC80 coiled-coil domain containing 80 32.7169
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 44.9332

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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