SHOGoiN Cell Transcriptome: GSM1269174

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269174


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T180Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 73.9620
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 68.0664
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 59.1501
4 ENSG00000108821 COL1A1 collagen, type I, alpha 1 58.5674
5 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 58.1886
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 44.7365
7 ENSG00000075624 ACTB actin, beta 42.8620
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 41.1234
9 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 39.2586
10 ENSG00000106366 SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 37.9959

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1166
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1166
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1166
60672 ENSG00000283118 NA -0.1166
60671 ENSG00000283110 NA -0.1166
60670 ENSG00000283108 NA -0.1166
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1166
60668 ENSG00000283098 NA -0.1166
60667 ENSG00000283097 NA -0.1166
60666 ENSG00000283096 NA -0.1166

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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