SHOGoiN Cell Transcriptome: GSM1269174

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269174


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T180Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 73.9620
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 68.0664
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 59.1501
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 58.5674
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 58.1886
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 44.7365
7 ENSG00000075624 ACTB actin beta 42.8620
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 41.1234
9 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 39.2586
10 ENSG00000106366 SERPINE1 serpin family E member 1 37.9959

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277143 NA -0.1166
57170 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1166
57169 ENSG00000277141 NA -0.1166
57168 ENSG00000277138 MIR6509 microRNA 6509 -0.1166
57166 ENSG00000277136 NA -0.1166
57165 ENSG00000277135 NA -0.1166
57164 ENSG00000277133 NA -0.1166
57163 ENSG00000277130 NA -0.1166
57162 ENSG00000277129 NA -0.1166
10 ENSG00000106366 SERPINE1 serpin family E member 1 37.9959

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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