SHOGoiN Cell Transcriptome: GSM1269176

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269176


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T182Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 91.1384
2 ENSG00000115414 FN1 fibronectin 1 78.5004
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.8725
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 67.3079
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 66.0532
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 48.8600
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 39.3133
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 38.6132
9 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 37.4221
10 ENSG00000075624 ACTB actin beta 34.7672

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1011
57169 ENSG00000277109 NA -0.1011
57168 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1011
57165 ENSG00000277103 NA -0.1011
57162 ENSG00000277099 NA -0.1011
10 ENSG00000075624 ACTB actin beta 34.7672
9 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 37.4221
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 38.6132
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 39.3133
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 48.8600

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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