SHOGoiN Cell Transcriptome: GSM1269177

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269177


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T183Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 129.9880
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 101.5052
3 ENSG00000155657 TTN titin 83.6378
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.1471
5 ENSG00000167552 TUBA1A tubulin, alpha 1a 45.3952
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.9295
7 ENSG00000109063 MYH3 myosin, heavy chain 3, skeletal muscle, embryonic 37.7950
8 ENSG00000159173 TNNI1 troponin I type 1 (skeletal, slow) 32.8866
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.5829
10 ENSG00000128595 CALU calumenin 29.0976

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0619
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0619
60673 ENSG00000283118 NA -0.0619
60672 ENSG00000283110 NA -0.0619
60671 ENSG00000283108 NA -0.0619
60670 ENSG00000283103 NA -0.0619
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0619
60668 ENSG00000283098 NA -0.0619
60667 ENSG00000283097 NA -0.0619
60666 ENSG00000283096 NA -0.0619

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...