SHOGoiN Cell Transcriptome: GSM1269177

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269177


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T183Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 129.9880
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 101.5052
3 ENSG00000155657 TTN titin 83.6378
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.1471
5 ENSG00000167552 TUBA1A tubulin alpha 1a 45.3952
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.9295
7 ENSG00000109063 MYH3 myosin heavy chain 3 37.7950
8 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 32.8866
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.5829
10 ENSG00000128595 CALU calumenin 29.0976

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277206 NA -0.0619
57169 ENSG00000277203 F8A1 coagulation factor VIII associated 1 -0.0619
57168 ENSG00000277202 MIR8063 microRNA 8063 -0.0619
57166 ENSG00000277200 NA -0.0619
57165 ENSG00000277199 LINC01632 long intergenic non-protein coding RNA 1632 -0.0619
57164 ENSG00000277198 RN7SL270P RNA, 7SL, cytoplasmic 270, pseudogene -0.0619
57162 ENSG00000277196 proline dehydrogenase 1, mitochondrial -0.0619
10 ENSG00000128595 CALU calumenin 29.0976
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.5829
8 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 32.8866

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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