SHOGoiN Cell Transcriptome: GSM1269179

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269179


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T185Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 181.7274
2 ENSG00000167552 TUBA1A tubulin, alpha 1a 70.4288
3 ENSG00000155657 TTN titin 57.6478
4 ENSG00000143632 ACTA1 actin, alpha 1, skeletal muscle 41.0605
5 ENSG00000159173 TNNI1 troponin I type 1 (skeletal, slow) 34.7780
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 25.4204
7 ENSG00000133055 MYBPH myosin binding protein H 23.6338
8 ENSG00000103994 ZNF106 zinc finger protein 106 22.2756
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 21.6140
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 21.0776

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0788
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0788
60673 ENSG00000283118 NA -0.0788
60672 ENSG00000283110 NA -0.0788
60671 ENSG00000283108 NA -0.0788
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0788
60669 ENSG00000283098 NA -0.0788
60668 ENSG00000283097 NA -0.0788
60667 ENSG00000283096 NA -0.0788
60666 ENSG00000283093 NA -0.0788

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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