SHOGoiN Cell Transcriptome: GSM1269181

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269181


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T187Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 89.3102
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.5805
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 86.5310
4 ENSG00000115414 FN1 fibronectin 1 81.8373
5 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 54.8483
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 42.2246
7 ENSG00000137801 THBS1 thrombospondin 1 40.5200
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 33.9735
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 32.0342
10 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 28.7362

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277095 NA -0.1056
57169 ENSG00000277089 NA -0.1056
57168 ENSG00000277087 NA -0.1056
57167 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1056
57166 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1056
57164 ENSG00000277081 NA -0.1056
57163 ENSG00000277077 NA -0.1056
57162 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1056
10 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 28.7362
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 32.0342

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...