SHOGoiN Cell Transcriptome: GSM1269182

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269182


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T188Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 90.6332
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.2787
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 65.5486
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 59.8681
5 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 57.8855
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 39.3533
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 37.9191
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 35.8240
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 33.7711
10 ENSG00000075624 ACTB actin beta 33.6164

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277120 MIR6089 microRNA 6089 -0.1155
57168 ENSG00000277119 NA -0.1155
57167 ENSG00000277118 NA -0.1155
57166 ENSG00000277117 ICOS ligand -0.1155
57163 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1155
57162 ENSG00000277109 NA -0.1155
10 ENSG00000075624 ACTB actin beta 33.6164
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 33.7711
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 35.8240
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 37.9191

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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