SHOGoiN Cell Transcriptome: GSM1269183

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269183


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T189Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 119.7545
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 107.6781
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 71.6724
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 51.8023
5 ENSG00000115414 FN1 fibronectin 1 48.8999
6 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 45.1451
7 ENSG00000108821 COL1A1 collagen, type I, alpha 1 41.6338
8 ENSG00000137801 THBS1 thrombospondin 1 37.5339
9 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 36.3364
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.6699

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0955
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0955
60673 ENSG00000283118 NA -0.0955
60672 ENSG00000283110 NA -0.0955
60671 ENSG00000283108 NA -0.0955
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0955
60669 ENSG00000283098 NA -0.0955
60668 ENSG00000283097 NA -0.0955
60667 ENSG00000283096 NA -0.0955
60666 ENSG00000283095 NA -0.0955

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...