SHOGoiN Cell Transcriptome: GSM1269184

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269184


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T190Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 104.3283
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 83.7803
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 61.2514
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 60.4281
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 46.0970
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 44.2593
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 37.8038
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.2787
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 34.8087
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.6512

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1182
57169 ENSG00000277047 NA -0.1182
57167 ENSG00000277041 NA -0.1182
57166 ENSG00000277040 NA -0.1182
57165 ENSG00000277039 NA -0.1182
57164 ENSG00000277035 NA -0.1182
57163 ENSG00000277034 NA -0.1182
57162 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1182
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.6512
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 34.8087

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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