SHOGoiN Cell Transcriptome: GSM1269185

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269185


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T191Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 93.0796
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 78.7124
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 76.0489
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.4473
5 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 51.7074
6 ENSG00000167552 TUBA1A tubulin, alpha 1a 42.3506
7 ENSG00000108821 COL1A1 collagen, type I, alpha 1 40.3356
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH dehydrogenase 2 38.6604
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.6886
10 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 27.3349

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1101
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1101
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1101
60672 ENSG00000283118 NA -0.1101
60671 ENSG00000283110 NA -0.1101
60670 ENSG00000283108 NA -0.1101
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1101
60668 ENSG00000283098 NA -0.1101
60667 ENSG00000283097 NA -0.1101
60666 ENSG00000283096 NA -0.1101

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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