SHOGoiN Cell Transcriptome: GSM1269186

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269186


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T192Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 95.6604
2 ENSG00000115414 FN1 fibronectin 1 94.2070
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 87.4923
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 47.1401
5 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 46.1460
6 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 44.4717
7 ENSG00000075624 ACTB actin, beta 41.5242
8 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.2858
9 ENSG00000184009 ACTG1 actin gamma 1 34.9548
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 31.2283

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1012
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1012
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1012
60672 ENSG00000283118 NA -0.1012
60671 ENSG00000283110 NA -0.1012
60670 ENSG00000283108 NA -0.1012
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1012
60668 ENSG00000283098 NA -0.1012
60667 ENSG00000283097 NA -0.1012
60666 ENSG00000283096 NA -0.1012

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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