SHOGoiN Cell Transcriptome: GSM1269188

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269188


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T193Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 144.6337
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 89.3279
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 74.5756
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 42.1315
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.9193
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 35.7252
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.9735
8 ENSG00000091986 CCDC80 coiled-coil domain containing 80 28.8036
9 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 25.4762
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.4398

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57168 ENSG00000277120 MIR6089 microRNA 6089 -0.0888
57167 ENSG00000277119 NA -0.0888
57166 ENSG00000277118 NA -0.0888
57165 ENSG00000277117 ICOS ligand -0.0888
57162 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0888
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.4398
9 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 25.4762
8 ENSG00000091986 CCDC80 coiled-coil domain containing 80 28.8036
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.9735
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 35.7252

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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