SHOGoiN Cell Transcriptome: GSM1269190

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269190


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T195Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 128.0616
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.7313
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 74.3362
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.8826
5 ENSG00000075624 ACTB actin beta 40.8133
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.6617
7 ENSG00000137801 THBS1 thrombospondin 1 32.9197
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 32.5288
9 ENSG00000184009 ACTG1 actin gamma 1 31.8792
10 ENSG00000167552 TUBA1A tubulin alpha 1a 26.5267

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1031
57168 ENSG00000277109 NA -0.1031
57167 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1031
57164 ENSG00000277103 NA -0.1031
10 ENSG00000167552 TUBA1A tubulin alpha 1a 26.5267
9 ENSG00000184009 ACTG1 actin gamma 1 31.8792
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 32.5288
7 ENSG00000137801 THBS1 thrombospondin 1 32.9197
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.6617
5 ENSG00000075624 ACTB actin beta 40.8133

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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