SHOGoiN Cell Transcriptome: GSM1269193

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269193


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T198Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 131.5919
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 58.9386
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 54.8596
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 52.5207
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 47.7864
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 42.0238
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 36.1596
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.3518
9 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 29.6852
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.5440

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277128 NA -0.1105
57170 ENSG00000277127 NA -0.1105
57169 ENSG00000277125 NA -0.1105
57168 ENSG00000277124 NA -0.1105
57164 ENSG00000277120 MIR6089 microRNA 6089 -0.1105
57163 ENSG00000277119 NA -0.1105
57162 ENSG00000277118 NA -0.1105
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.5440
9 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 29.6852
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.3518

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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